Other publications
Arianna Carolina Rosa, Elisa Benetti, Margherita Gallicchio, Valentina Boscaro, Luigi Cangemi, Chiara Dianzani, Gianluca Miglio. Analyzing cysteine site neighbors in proteins to reveal dimethyl fumarate targets Proteomics 2019;19(4):e1800301. DOI: 10.1002/pmic.201800301.
Gianluca Costagliola, Federico Bosia, Nicola M.Pugno. A 2-D model for friction of complex anisotropic surfaces. Journal of the Mechanics and Physics of Solids, Volume 112, March 2018, Pages 50-65. [ref]
Pistone, L., M. Onorato, and S. Chibbaro. Thermalization in the
discrete nonlinear Klein-Gordon chain in the wave-turbulence framework.
EPL (Europhysics Letters) 121.4 (2018): 44003.
F. Sodano, B. Rolando, F. Spyrakis, M. Failla, L. Lazzarato, E. Gazzano,
C. Riganti, R. Fruttero, A. Gasco, S. Sortino: “Tuning the hydrophobicity
of a mitochondria-targeted NO photodonor” ChemMedChem, 2018, 13(12),
1238-1245. doi:10.1002/cmdc.201800088.
(2019)
Molecular dynamics simulations reveal the
determinants of cyclin-dependent kinase 2 inhibition by
5-nitrosopyrimidine derivatives,
Journal of Biomolecular Structure and Dynamics,
DOI: 10.1080/07391102.2019.1666032
Claudia Misale, Maurizio Drocco, Guy Tremblay, Alberto R. Martinelli, Marco Aldinucci, "PiCo: High-performance data analytics pipelines in modern C++", Future Generation Computer Systems,Volume 87,2018,Pages 392-403,ISSN 0167-739X,https://doi.org/10.1016/j.future.2018.05.030.
Wolff, J.O., Paterno, G.B., Liprandi, D., Ramírez, M.J., Bosia, F., van
der, Meijden, A., Michalik, P., Smith, H.M., Jones, B.R., Ravelo, A.M.,
Pugno, N. and Herberstein, M.E. (2019), Evolution of aerial spider webs
coincided with repeated structural optimization of silk anchorages.
Evolution, 73: 2122-2134. doi:10.1111/evo.13834
Chiara Riganti, Marialessandra Contino, Stefano Guglielmo, Maria G. Perrone, Iris C. Salaroglio, Vladan Milosevic, Roberta Giampietro, Francesco Leonetti, Barbara Rolando, Loretta Lazzarato, Nicola A. Colabufo, and Roberta Fruttero, "Design, Biological Evaluation, and Molecular Modeling of Tetrahydroisoquinoline Derivatives: Discovery of A Potent P-Glycoprotein Ligand Overcoming Multidrug Resistance in Cancer Stem Cells", Journal of Medicinal Chemistry 2019 62 (2), 974-986, DOI: 10.1021/acs.jmedchem.8b01655
Signorile, M.; Salvini, C.; Zamirri, L.; Bonino, F.; Martra, G.; Sodupe,
M.; Ugliengo, P. Formamide, "Adsorption at the Amorphous Silica Surface: A
Combined Experimental and Computational Approach". Life 2018, 8, 42.
S. Pantaleone, P. Ugliengo, M. Sodupe, A. Rimola, "When the Surface Matters: Prebiotic Peptide-Bond Formation on the TiO2 (101) Anatase Surface through Periodic DFT-D2 Simulations", Chemistry – A European Journal @2018, pagg.16292-16301,24, 61 AID - 10.1002/chem.201803263, DOI: https://onlinelibrary.wiley.com/doi/abs/10.1002/ch...
Daniele Liprandi and Federico Bosia and Nicola M. Pugno, "A numerical model for the peeling of elastic membranes",2019,eprint: 1905.04687,arXiv,Class=physics.comp-ph
Giorgio Audrito ; Roberto Casadei ; Ferruccio Damiani ; Mirko Virol , "Compositional Blocks for Optimal Self-Healing Gradients", 2017 IEEE 11th International Conference on Self-Adaptive and Self-Organizing Systems (SASO), 18-22 Sept. 2017, DOI: https://doi.org/10.1109/SASO.2017.18
Michele Cutini,Bartolomeo Civalleri,Piero Ugliengo, "Cost-Effective Quantum Mechanical Approach for Predicting Thermodynamic and Mechanical Stability of Pure-Silica Zeolites", ACS Omega 2019, 4, 1, 1838-1846,January 23, 2019, DOI: https://doi.org/10.1021/acsomega.8b03135
Paolo Viviani ; Maurizio Drocco ; Marco Aldinucci, "Scaling Dense Linear Algebra on Multicore and Beyond: A Survey", 2018 26th Euromicro International Conference on Parallel, Distributed and Network-based Processing (PDP), 21-23 March 2018, DOI: https://doi.org/10.1109/PDP2018.2018.00122
Francesca Peccati,Cristina Bernocco,Piero Ugliengo,Marta Corno, "Properties and Reactivity toward Water of A Type Carbonated Apatite and Hydroxyapatite Surfaces",J. Phys. Chem. C2018, 122, 7, 3934-3944,February 1, 2018, DOI: https://doi.org/10.1021/acs.jpcc.7b12738
Gianluca Miglio, Lara Basso, Lucrezia G. Armando, Sara Traina, Elisa
Benetti, Abdoulaye Diarassouba, Raffaella Baroetto Parisi, Mariangela
Esiliato, Cristina Rolando, Elisa Remani, Clara Cena. "A network approach
for the study of drug prescriptions: analysis of administrative records
from a local health unit (ASL TO4, Regione Piemonte, Italy)". Int. J. Environ. Res. Public. Health. 2021; 18(9): 4859. doi: 10.3390/ijerph18094859.
Presentations at conferences
F. Spyrakis: “Computational
methods for antibiotic discovery” in OUTREACH FINAL Conference ITN MSCA “INTEGRATE”
Interdisciplinary Training Network for Validation of Gram-negative
Antibacterial Targets. Parma, Italy, November 21st-23rd, 2018.
Invited
Oral Presentation
Gianluca Miglio, Lara Basso, Lucrezia G. Armando, Sara Traina, Abdoulaye
Diarassouba, Raffaella Baroetto Parisi, Mariangela Esiliato, Cristina
Rolando, Elisa Remani, Clara Cena,
A Network Approach for the Study of
Drug (co)Prescription: Analysis of Data from the ASL TO4 (Regione
Piemonte, Italy)".
Pharmadvances 2021: 3; 214-215 (http://www.pharmadvances.com/the-40th-congress-of-the-italian-pharmacological-society-sif/).
Posters
Arianna Carolina Rosa, Elisa Benetti, Jessica Audisio, Gianluca Miglio. Targets of dimethyl fumarate: a novel predictive method based on concepts of network theory and machine learning. in 39° Congresso Nazionale della Società Italiana di Farmacologia – Firenze 20-23 Novembre 2019. Poster Presentation.
Arianna Carolina Rosa, Elisa Benetti, Gianluca Miglio. Ampicillin for the treatment of the early-onset neonatal infections: a pharmacometric assessment by stochastic simulations. in 39° Congresso Nazionale della Società Italiana di Farmacologia – Firenze, 20-23 Novembre 2019. Poster Presentation.
F. Spyrakis, O. De Bei, M. Marchetti, E. Gianquinto, B. Campanini, L. Ronda, S. Bettati: “Development of a high throughput assay to identify inhibitors of S. aureus IsdB binding to human hemoglobin” in O2BiP (XXth International Conference on Oxygen Binding and Sensing Proteins, Barcelona, Spain, September 3rd-6th, 2018. Poster Presentation.
E. Gianquinto, S. Di Lella, L. Lazzarato, S. Guglielmo, R. Fruttero, O. De Bei, M. Marchetti, B. Campanini, L. Ronda, S. Bettati, F.J. Luque, F. Spyrakis: “Investigating and disrupting the interaction between hemoglobin and MRSA hemophores: in silico approaches to design novel antimicrobials” in O2BiP (XXth International Conference on Oxygen Binding and Sensing Proteins, Barcelona, Spain, September 3rd-6th, 2018. Poster Presentation.
F. Spyrakis, E. Gianquinto, S. Di Lella, L. Lazzarato, S. Guglielmo, R. Fruttero, O. De Bei, M. Marchetti, B. Campanini, L. Ronda, S. Bettati: “Investigating the interaction between human hemoglobin and S. aureus IsdB to design novel antimicrobials” in MedChemSicily2018 (Italian-Spanish-Portoguese Joint Meeting in Medicinal Chemistry), Palermo, Italy, July 17th-20th, 2018. Poster Presentation.
S. Bagnasco , S. Vallero, S. LUSSO, M. CONCAS, M. ALDINUCCI, S. RABELLINO: “Managing an heterogeneous scientific computingcluster with cloud-like tools: ideas and experience” in CHEP 2018 Conference, Sofia, Bulgaria, 9-13 July 2018. Poster Presentation.
Benedetta
Ferrara, Gianluca Miglio. Analysis of topological features
for the priorization of protein succination.
38° Congresso Nazionale della Società Italiana di Farmacologia, Rimini, 25-28 Ottobre 2017, Poster Presentation
Arianna Carolina Rosa, Gianluca Miglio. Analysis of residue interaction networks to improve prediction of protein succination. Pharmacology 2017 – British Pharmacological Society – London 11-13 Dicembre 2017. Poster Presentation.
Lara Basso, Arianna Carolina Rosa, Elisa Benetti, Gianluca Miglio, Natalizumab Dosing in Multiple Sclerosis: In Silico Assessment of
Dosing Strategies. Pharmadvances 2021: 3; 215-216 (http://www.pharmadvances.com/the-40th-congress-of-the-italian-pharmacological-society-sif/).